Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911570.1_cds_XP_016461557.1_54863
CDS Infomation

[gene=LOC107784881] [db_xref=GeneID:107784881] [protein=laccase-12-like] [protein_id=XP_016461557.1] [location=join(1062..1172,1264..1415,1536..1780,1916..2044,2190..3146,3538..3668)] [gbkey=CDS]
Sequence

ATGGAGGGTTTCAAAAGCATTGCTAACCCTTTGAGTTCTTTCTTCTTTATATGCATTTTG
CTTCTCTTTGCAAATGCAGCATTTGGGAAAACTCACTACCATGATTTTGTTATTCAAGCA
ACACCAGTGAAGAGGCTGTGCAAAACTCACAACACCATAACGGTGAACGGACAATTCCCT
GGACCAACATTAGAAGTAAACAACGGGGATACTCTAGTTGTCAACGTTGTTAATAAAGCT
CGATATAATGTCACTATTCACTGGCATGGGGTAAGGCAAATGAGAACAGGATGGGCAGAT
GGACCAGAATTTGTCACTCAGTGTCCGATTAGACCAGGAAAGAGTTACACTTACCGGTTT
ACAATTCAAGGACAGGAAGGGACTCTATGGTGGCACGCTCACAGCTCGTTGCTCAGGGCA
ACGGTTTATGGAGCTCTAATTATCCATCCAAAAGAAGGAGAATCCTATCCATTTGCTAAG
CCGAAAAGAGAAACACCAATTATGCTTGGTGAGTGGTGGGATGCAAACCCTATTGACGTT
ATAAGACAAGCGACAAGAACAGGAGCAGCTCCTAATGTATCTGATGCTTACACCATTAAT
GGTCAAGCAGGTGACCTCTACAAGTGTTCCAGTCAAGATACCACCATAGTCCCTGTGGAC
GCTGGCGAAACCAACCTCCTTCGAGTTATCAATGCTGCACTCAATCAACAACTTTTCTTT
ACTGTGGCCAACCACAAGCTTACTGTTGTTGGAGCAGATGCCTCTTATGTTAAACCCTTT
ACAACATCAGTCCTCATGCTCGGACCAGGCCAGACAACTGATGTCCTGATCACAGCTGAT
CAGCAACCAGCTAGATATTACATGGCAGCACGTGCCTACGCAAGCGCTCAAGGCGCTGCC
TTTGATAATACGACAACCACAGCCATCCTTGAGTACAAGACAGCTTCTTGTTCTTCCAAT
TGTGTCAAGACAAATCCAGTTTCCCCATCTCTACCAGCATATAATGACACGGCCACTGCA
ACAGCCTTCACAACCAAATTCAGAAGCCCAAGAAAGGTCGAGGTGCCCCCTGAGATCGAT
GAAAATCTATTCTTCACAGTCGGGCTAGGACTCAACAATTGCCCAAGAGGCGCTCGATCC
AGAAACTGTCAAGGTCCAAATGGAACTCGATTCACTGCCAGTATGAACAATGTATCATTT
GTTCTACCATCCAACTATTCCCTGCTACAAGCACATCACCAAGGCATACCTGGTGTTTTC
TCAACTGATTTTCCAGCAAAACCACCTGTAAAATTTGATTATACAGGCAATGTAAGCCGG
TCACTATGGCAACCTATTCGAGGAACAAAGCTGTACAAGCTGAAATATGGGGCAAGAGTG
CAAGTTGTGTTACAAGGGACAAGCATCTTCACTGCTGAGAACCATCCAATTCATCTTCAC
GGATATGATTTTTACATCATTGCAGAGGGTTTCGGTAACTTTAATCCAAAAAGAGATACA
GCTAAATTCAACCTTGTTGATCCACCTCTCAGAAATACGGCCAGTGTACCCGTCAATGGA
TGGGCGGTTATCAGATTTGTCGCTGACAATCCAGGAGTTTGGCTAATGCATTGTCACCTG
GATGTTCACATTGGCTGGGGTTTGGCAATGGCGTTCATCGTCGAAAACGGAGTTACTGAA
CTAGAATCACTGGAGGCTCCTCCAGTTGATTTGCCTGTCTGTTAA

Peptide Sequence

PEP ID

XP_016461557.1
PEP Infomation

PREDICTED: laccase-12-like [Nicotiana tabacum]
Sequence

MEGFKSIANPLSSFFFICILLLFANAAFGKTHYHDFVIQATPVKRLCKTHNTITVNGQFP
GPTLEVNNGDTLVVNVVNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGKSYTYRF
TIQGQEGTLWWHAHSSLLRATVYGALIIHPKEGESYPFAKPKRETPIMLGEWWDANPIDV
IRQATRTGAAPNVSDAYTINGQAGDLYKCSSQDTTIVPVDAGETNLLRVINAALNQQLFF
TVANHKLTVVGADASYVKPFTTSVLMLGPGQTTDVLITADQQPARYYMAARAYASAQGAA
FDNTTTTAILEYKTASCSSNCVKTNPVSPSLPAYNDTATATAFTTKFRSPRKVEVPPEID
ENLFFTVGLGLNNCPRGARSRNCQGPNGTRFTASMNNVSFVLPSNYSLLQAHHQGIPGVF
STDFPAKPPVKFDYTGNVSRSLWQPIRGTKLYKLKYGARVQVVLQGTSIFTAENHPIHLH
GYDFYIIAEGFGNFNPKRDTAKFNLVDPPLRNTASVPVNGWAVIRFVADNPGVWLMHCHL
DVHIGWGLAMAFIVENGVTELESLEAPPVDLPVC

Transcript Sequence

Gene sequence data has not been registered.